Protein ZmRcd1L1
ZmRcd1L1 is a protein in the Rcd1-like family.
Information
TF Name: ZmRcd1L1
Species: Maize
TF Family: Rcd1-like
Gene Name(Synonym):
Uniprot ID: B6TTL6

Protein ZmRcd1L1

ZmRcd1L1 is a protein in the Rcd1-like family.

Overview of domains present in v5 transcripts
PF04078
Zm00001eb213450_T001
Zm00001eb213450_T002
Zm00001eb213450_T003
Zm00001eb213450_T004
Zm00001eb213450_T005

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d013120DAPseq no logo sequence fimo position
Zm00001d013120DAPseq no logo sequence fimo position
Zm00001d013120ChIPseq no logo sequence fimo position
Zm00001d013120PChIPseq no logo sequence fimo position

Interactions where ZmRcd1L1 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmRcd1L1 is the target  
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There are 52 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb213450_T001 from maize genome v5

Amino Acid Sequence
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MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKKREKCEDLALLLWHSFGTMAALLQEIV
SIYRLLSPPQLSFDQSTRVCNVLVLLKCVASHPDTRMPFLNAQFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDD
HEVIVNLLCSEIVPLCLRAIEMGSELSKKVATFILQKIMLDDTGLAYVCASSERFCAVANVLAQMVEALAEQPSPRTLKN
TIRCYLRLTDDRRACQALRDYLPIALRDGTFNGLIEVDLTARLWLHQLLHNVMMSDSGGGPRPAPGPVMGM

MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKKREKCEDLALLLWHSFGTMAALLQEIV
SIYRLLSPPQLSFDQSTRVCNVLVLLKCVASHPDTRMPFLNAQFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDD
HEVIVNLLCSEIVPLCLRAIEMGSELSKKVATFILQKIMLDDTGLAYVCASSERFCAVANVLAQMVEALAEQPSPRTLKN
TIRCYLRLTDDRRACQALRDYLPIALRDGTFNGLIEVDLTARLWLHQLLHNVMMSDSGGGPRPAPGPVMGM

MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKKREKCEDLALLLWHSFGTMAALLQEIV
SIYRLLSPPQLSFDQSTRVCNVLVLLKCVASHPDTRMPFLNAQFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDD
HEVIVNLLCSEIVPLCLRAIEMGSELSKKVATFILQKIMLDDTGLAYVCASSERFCAVANVLAQMVEALAEQPSPRTLKN
TIRCYLRLTDDRRACQALRDYLPIALRDGTFNGLIEVDLTARLWLHQLLHNVMMSDSGGGPRPAPGPVMGM

MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKKREKCEDLALLLWHSFGTMAALLQEIV
SIYRLLSPPQLSFDQSTRVCNVLVLLKCVASHPDTRMPFLNAQFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDD
HEVIVNLLCSEIVPLCLRAIEMGSELSKKVATFILQKIMLDDTGLAYVCASSERFCAVANVLAQMVEALAEQPSPRTLKN
TIRCYLRLTDDRRACQALRDYLPIALRDGTFNGLIEVDLTARLWLHQLLHNVMMSDSGGGPRPAPGPVMGM

MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKKREKCEDLALLLWHSFGTMAALLQEIV
SIYRLLSPPQLSFDQSTRVCNVLVLLKCVASHPDTRMPFLNAQFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDD
HEVIVNLLCSEIVPLCLRAIEMGSELSKKVATFILQKIMLDDTGLAYVCASSERFCAVANVLAQMVEALAEQPSPRTLKN
TIRCYLRLTDDRRACQALRDYLPIALRDGTFNGLIEVDLTARLWLHQLLHNVMMSDSGGGPRPAPGPVMGM

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04078
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Nucleotide Sequence
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ACTAGACGGTCTTACATTCCCAAAT...

AC191251.3_FGT005 from maize genome v3


Related TFome: pUT5555

Amino Acid Sequence
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MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKKREKCEDLALLLWHSFGTMAALLQEIV
SIYRLLSPPQLSFDQSTRVCNVLVLLKCVASHPDTRMPFLNAQFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDD
HEVIVNLLCSEIVPLCLRAIEMGSELSKKVATFILQKIMLDDTGLAYVCASSERFCAVANVLAQMVEALAEQPSPRTLKN
TIRCYLRLTDDRRACQALRDYLPIALRDGTFNGLIEVDLTARLWLHQLLHNVMMSDSGGGPRPAPGPVMGM

Nucleotide Sequence
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AAATAACTCGTCGGAGTCAGTACGG...

Zm00001d013120_T001 from maize genome v4

Amino Acid Sequence
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MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKKREKCEDLALLLWHSFGTMAALLQEIV
SIYRLLSPPQLSFDQSTRVCNVLVLLKCVASHPDTRMPFLNAQFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDD
HEVIVNLLCSEIVPLCLRAIEMGSELSKKVATFILQKIMLDDTGLAYVCASSERFCAVANVLAQMVEALAEQPSPRTLKN
TIRCYLRLTDDRRACQALRDYLPIALRDGTFNGLIEVDLTARLWLHQLLHNVMMSDSGGGPRPAPGPVMGM

Nucleotide Sequence
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AAATAACTCGTCGGAGTCAGTACGG...

Zm00001eb213450_T002 from maize genome v5

Amino Acid Sequence
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MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKKREKCEDLALLLWHSFGTMAALLQEIV
SIYRLLSPPQLSFDQSTRVCNVLVLLKCVASHPDTRMPFLNAQFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDD
HEVIVNLLCSEIVPLCLRAIEMGSELSKKMVEALAEQPSPRTLKNTIRCYLRLTDDRRACQALRDYLPIALRDGTFNGLI
EVDLTARLWLHQLLHNVMMSDSGGGPRPAPGPVMGM

Nucleotide Sequence
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ACTAGACGGTCTTACATTCCCAAAT...

Zm00001eb213450_T003 from maize genome v5

Amino Acid Sequence
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MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKKREKCEDLALLLWHSFGTMAALLQEIV
SIYRLLSPPQLSFDQSTRVCNVLVLLKFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDDHEVIVNLLCSEIVPLC
LRAIEMGSELSKKVATFILQKIMLDDTGLAYVCASSERFCAVANVLAQMVEALAEQPSPRTLKNTIRCYLRLTDDRRACQ
ALRDYLPIALRDGTFNGLIEVDLTARLWLHQLLHNVMMSDSGGGPRPAPGPVMGM

Nucleotide Sequence
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ACTAGACGGTCTTACATTCCCAAAT...

Zm00001eb213450_T004 from maize genome v5

Amino Acid Sequence
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MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKREKCEDLALLLWHSFGTMAALLQEIVS
IYRLLSPPQLSFDQSTRVCNVLVLLKCVASHPDTRMPFLNAQFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDDH
EVIVNLLCSEIVPLCLRAIEMGSELSKKVATFILQKIMLDDTGLAYVCASSERFCAVANVLAQMVEALAEQPSPRTLKNT
IRCYLRLTDDRRACQALRDYLPIALRDGTFNGLIEVDLTARLWLHQLLHNVMMSDSGGGPRPAPGPVMGM

Nucleotide Sequence
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ACTAGACGGTCTTACATTCCCAAAT...

Zm00001eb213450_T005 from maize genome v5

Amino Acid Sequence
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MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKREKCEDLALLLWHSFGTMAALLQEIVS
IYRLLSPPQLSFDQSTRVCNVLVLLKCVASHPDTRMPFLNAQFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDDH
EVIVNLLCSEIVPLCLRAIEMGSELSKKMVEALAEQPSPRTLKNTIRCYLRLTDDRRACQALRDYLPIALRDGTFNGLIE
VDLTARLWLHQLLHNVMMSDSGGGPRPAPGPVMGM

Nucleotide Sequence
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ACTAGACGGTCTTACATTCCCAAAT...


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